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Medientyp:
Buch
Titel:
Data mining for systems biology
:
methods and protocols
Enthält:
Identifying bacterial strains from sequencing data
/ Tommi Mäklin, Jukka Corander, and Antti Honkela
MetaVW : large-scale machine learning for metagenomics sequence classification
/ Kévin Vervier, Pierre Mahé, and Jean-Philippe Vert
Online interactive microbial classification and geospatial distributional analysis using BioAtlas
/ Jesper Lund, Qihua Tan, and Jan Baumbach
Generative models for quantification of DNA modifications
/ Tarmo Äijö, Richard Bonneau, and Harri Lähdesmäki
DiMmer : discovery of differentially methylated regions in epigenome-wide association study (EWAS) data
/ Tobias Frisch, Jonatan Gøttcke, Richard Röttger, Qihua Tan, and Jan Baumbach
Implementing a transcription factor interaction prediction system using the GenoMetric query language
/ Stefano Perna, Arif Canakoglu, Pietro Pinoli, Stefano Ceri, and Limsoon Wong
Multiple testing tool to detect combinatorial effects in biology
/ Aika Terada and Koji Tsuda
SiBIC : a tool for generating a network of biclusters captured by maximal frequent itemset mining
/ Kei-ichiro Takahashi, David A. duVerle, Sohiya Yotsukura, Ichigaku Takigawa, and Hiroshi Mamitsuka
Computing and visualizing gene function similarity and coherence with NaviGO
/ Ziyun Ding, Qing Wei, and Daisuke Kihara
Analyzing glycan-binding profiles using weighted multiple alignment of trees
/ Kiyoko F. Aoki-Kinoshita
Analysis of fluxomic experiments with principal metabolic FluxMode analysis
/ Sahely Bhadra and Juho Rousu
Analyzing tandem mass spectra using the DRIP toolkit : training, searching, and post-processing
/ John T. Halloran
Sparse modeling to analyze drug-target interaction networks
/ Yoshihiro Yamanishi
DrugE-rank : predicting drug-target interactions by learning to rank
/ Jieyao Deng, Qingjun Yuan, Hiroshi Mamitsuka, and Shanfeng Zhu
MeSHLabeler and DeepMeSH : recent progress in large-scale MeSH indexing
/ Shengwen Peng, Hiroshi Mamitsuka, and Shanfeng Zhu
Disease gene classification with metagraph representations
/ Sezin Kircali Ata, Yuan Fang, Min Wu, Xiao-Li Li, and Xiaokui Xiao
Inferring antimicrobial resistance from pathogen genomes in KEGG
/ Minoru Kanehisa.